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Hoogerheide, D.P., S. Garaj, and J.A. Golovchenko. 2009. Probing surface charge fluctuations with solid-state nanopores. Phys. Rev. Lett. 102: 256804-1 - 256804-4.

Branton, D., D.W. Deamer, A. Marziali, H. Bayley, S.A. Benner, T. Butler, M. Di Ventra, S. Garaj, A. Hibbs, X. Huang, S.B. Jovanovich, P.S. Krstic, S. Lindsay, X.S. Ling, C.H. Mastrangelo, A. Meller, J.S. Oliver, Y.V. Pershin, J.M. Ramsey, R. Riehn, G.V. Soni, V. Tabard-Cossa, M. Wanunu, M. Wiggin, and J.A. Schloss. 2008. The potential and challenges of nanopore sequencing. Nature Biotechnology 26: 1146-1153.

Gershow, M. and J.A. Golovchenko. 2007. Recapturing and trapping single molecules with a solid-state nanopore. Nature Nanotechnology 2: 775-779. (including a related New & Views article by Derek Stein).

Hoogerheide, D.P. and J.A. Golovchenko. 2007. Dynamics of ion beam stimulated surface mass transport to nanopores. in Ion-Beam-Based Nanofabrication, edited by D. Ila, J. Baglin, N. Kishimoto, and P.K. Chu (Mater. Res. Soc. Symp. Proc. Volume 1020, Warrendale, PA), paper number 1020-GG02-01.

Fologea, D., E. Brandin, J. Uplinger, D. Branton, and J. Li. 2007. DNA conformation and base number simultaneously determined in a nanopore. Electrophoresis 28: 3186-3192.

Hughes, M.E., E. Brandin, and J.A. Golovchenko. 2007. Optical absorption of DNA-carbon nanotube structures. Nano Letters 7: 1191-1194.

Kim, Y.-R., P. Chen, M.J. Aziz, D. Branton, and J.J. Vlassak. 2006. Focused ion beam induced deflections of freestanding thin films. J. Appl. Phys. 100: 104322-1 - 104322-9.

Park, S.Y., C.J. Russo, D. Branton, and H.A. Stone. 2006. Eddies in a bottleneck: An arbitrary Debye length theory for capillary electroosmosis. J. Colloid Interface Sci. 297: 832-839.

Peng, H.B., M.E. Hughes, and J.A. Golovchenko. 2006. Room-temperature single-charge sensitivity in carbon nanotube field-effect transistors. Appl. Phys. Lett. 89: 243502-1 - 243502-3.

Cai, Q., B. Ledden, E. Krueger, J.A. Golovchenko, and J. Li. 2006. Nanopore sculpting with noble gas ions. J. Appl. Phys. 100: 024914-1 - 024914-6.

Mitsui, T., D. Stein, Y.-R. Kim, D. Hoogerheide, and J.A. Golovchenko. 2006. Nanoscale volcanoes: Accretion of matter at ion-sculpted nanopores. Phys. Rev. Lett. 96: 036102-1 - 036102-4.

King, G.M. and J.A. Golovchenko. 2005. Probing nanotube-nanopore interactions. Phys. Rev. Lett. 95: 216103-1 - 216103-4.

Fologea, D., M. Gershow, B. Ledden, D.S. McNabb, J.A. Golovchenko, and J. Li. 2005. Detecting single stranded DNA with a solid state nanopore. Nano Letters 5: 1905-1909.

King, G.M., G. Schürmann, D. Branton, and J.A. Golovchenko. 2005. Nanometer patterning with ice. Nano Letters 5: 1157-1160.

Ristroph, T., A. Goodsell, J.A. Golovchenko, and L.V. Hau. 2005. Detection and quantized conductance of neutral atoms near a charged carbon nanotube. Phys. Rev. Lett. 94: 066102-1 - 066102-4.

Chen, P., J. Gu, E. Brandin, Y.-R. Kim, Q. Wang, and D. Branton. 2004. Probing single DNA molecule transport using fabricated nanopores. Nano Letters 4: 2293-2298.

Wang, H., J.E. Dunning, A. P.-H. Huang, J.A. Nyamwanda, and D. Branton. 2004. DNA heterogeneity and phosphorylation unveiled by single-molecule electrophoresis. Proc. Natl. Acad. Sci. U.S.A. 101: 13472-13477.

Peng, H.B. and J.A. Golovchenko. 2004. Coulomb blockade in suspended Si3N4-coated single-walled carbon nanotubes. Appl. Phys. Lett. 84: 5428-5430.

Chen, P., T. Mitsui, D.B. Farmer, J. Golovchenko, R.G. Gordon, and D. Branton. 2004. Atomic layer deposition to fine-tune the surface properties and diameters of fabricated nanopores. Nano Letters 4: 1333-1337.

Stein, D.M., C.J. McMullan, J. Li, and J.A. Golovchenko. 2004. Feedback-controlled ion beam sculpting apparatus. Review of Scientific Instruments 75: 900-905.

Peng, H.B., T.G. Ristroph, G.M. Schürmann, G.M. King, J. Yoon, V. Narayanamurti, and J.A. Golovchenko. 2003. Patterned growth of single-walled carbon nanotube arrays from a vapor-deposited Fe catalyst. App. Phys. Lett. 83: 4238-4240.

Li, J., M. Gershow, D. Stein, E. Brandin, and J.A. Golovchenko. 2003. DNA molecules and configurations in a solid-state nanopore microscope. Nature Materials 2: 611-615.

Sauer-Budge, A.F., J.A. Nyamwanda, D.K. Lubensky, and D. Branton. 2003. Unzipping kinetics of double-stranded DNA in a nanopore. Phys. Rev. Lett. 90: 238101-1 - 238101-4.

Stein, D., J. Li, and J.A. Golovchenko. 2002. Ion-beam sculpting time scales. Phys. Rev. Lett. 89: 276106-1 - 276106-4.

Deamer, D.W. and D. Branton. 2002. Characterization of nucleic acids by nanopore analysis. Acc. Chem. Res. 35: 817-825.

Meller, A. and D. Branton. 2002. Single molecule measurements of DNA transport through a nanopore. Electrophoresis 23: 2583-2591.

Branton, D. and A. Meller. 2002. Using nanopores to discriminate between single molecules of DNA. in Structure and Dynamics of Confined Polymers (Kasianowicz, J.J., Kellermayer, M.S.Z., and Deamer, D.W., eds.), Kluwer Academic Publishers, Dordrecht, The Netherlands, pp. 177-185. See preprint.

Wang, H. and D. Branton. 2001. Nanopores with a spark for single-molecule detection. Nature Biotechnology 19: 622-623.

Li, J., D. Stein, C. McMullan, D. Branton, M.J. Aziz, and J.A. Golovchenko. 2001. Ion-beam sculpting at nanometre length scales. Nature 412: 166-169.

Meller, A., L. Nivon, and D. Branton. 2001. Voltage-driven DNA translocations through a nanopore. Phys. Rev. Lett. 86: 3435-3438.

Meller, A., L. Nivon, E. Brandin, J. Golovchenko, and D. Branton. 2000. Rapid nanopore discrimination between single polynucleotide molecules. Proc. Natl. Acad. Sci. USA 97: 1079-1084.

Akeson, M., D. Branton, J.J. Kasianowicz, E. Brandin, and D.W. Deamer. 1999. Microsecond time-scale discrimination among polycytidylic acid, polyadenylic acid, and polyuridylic acid as homopolymers or as segments within single RNA molecules. Biophys. J. 77: 3227-3233.

Branton, D. and J. Golovchenko. 1999. Adapting to nanoscale events. Nature 398: 660-661.

Kasianowicz, J.J., E. Brandin, D. Branton, and D.W. Deamer. 1996. Characterization of individual polynucleotide molecules using a membrane channel. Proceedings of the National Academy of Sciences U.S.A. 93: 13770-13773.